MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Providencia alcalifaciens
WMus003.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 66
bases: 3,919,227 bps
CDS: 3,576
rRNA: 12
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,669
Total number of protein coding genes annotated/found:
3,576
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 179 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5002|JADGLZ010000010.1
SEQF5002_00053
Genome Viewer
NA
AA
807/269
67927-67121
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00054
Genome Viewer
NA
AA
1152/384
69548-68397
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00055
Genome Viewer
NA
AA
159/53
69706-69548
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00056
Genome Viewer
NA
AA
951/317
70693-69743
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00057
Genome Viewer
NA
AA
1023/341
71715-70693
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00058
Genome Viewer
NA
AA
183/61
72155-71973
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00059
Genome Viewer
NA
AA
1449/483
72408-73856
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00063
Genome Viewer
NA
AA
1275/425
77793-79067
O-acetyl-L-homoserine sulfhydrylase
SEQF5002|JADGLZ010000010.1
SEQF5002_00065
Genome Viewer
NA
AA
189/63
81412-81224
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00072
Genome Viewer
NA
AA
783/261
89074-89856
Isatin hydrolase
SEQF5002|JADGLZ010000010.1
SEQF5002_00074
Genome Viewer
NA
AA
894/298
91558-92451
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00076
Genome Viewer
NA
AA
2199/733
94332-96530
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00077
Genome Viewer
NA
AA
1509/503
96539-98047
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00078
Genome Viewer
NA
AA
423/141
98058-98480
1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase
SEQF5002|JADGLZ010000010.1
SEQF5002_00084
Genome Viewer
NA
AA
453/151
104861-105313
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00087
Genome Viewer
NA
AA
294/98
108061-108354
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00089
Genome Viewer
NA
AA
621/207
109616-108996
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00090
Genome Viewer
NA
AA
222/74
110311-110532
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00091
Genome Viewer
NA
AA
363/121
110747-111109
hypothetical protein
SEQF5002|JADGLZ010000010.1
SEQF5002_00092
Genome Viewer
NA
AA
393/131
111211-111603
hypothetical protein
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 179 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by